DNA Sequence Analysis

The websites listed in this section provide details on determining the composition (motifs, repeats, restriction endonuclease sites) and biophysical (Tm, melting temperature) characteristics of your DNA sequence and whether homologs exist. Resources are provided which allow one to convert sequence in one format, such as gbk, to another format (fna, faa) or the reverse complement; and design PCR primers.

Subcategories

Alignments Convert Sequence Composition DNA Motifs Homology Searches Repeats & Secondary Structure PCR Primer Design Phylogeny Promoters Restriction Endonuclease Sites Transcriptional Factors

Updated: October, 2025