Test sequences:

tmRNA (bacterial)
>gi|60328267:9-369 Aeromonas hydrophila PPD134/91 cryptic prophage tmRNA (ssrA) gene
TGGGGCTGATTCTGGATTCGACAAGATTCACGAAACCCAAGGTGCATGCCGAGGTGCGGTAGGCCTCGCT
AATAAACCGCAAAAAAATAGTCGCAAACGACGAAAACTACGCACTGGCAGCTTAATAACCTGCGCAGAGC
CCTTCTACCCTAGCATGCCTGTGTCCTAGGGAATCGGAAGGTCATCCTTCACAGGATCGTGTGGAAGTCC
TGCTCGGGGCGGAAGCATTAAAACCAATCGAGCTAGTCAATTCGTGGCGTGTCTCTCCGCAGCGGGTTGG
CGAATGTAAAGAGTGACTAAGCATGTAGTGCCAAGGATGTAGTAATTTTGGACGGGGGTTCAAATCCCCC
CAGCTCCACCA


tRNA (bacterial)
>gi|40074290:292-364 Spirochaeta aurantia tRNA-Ala 
GGGGGTATAGCTCAGTTGGTAGAGCGTCAGCTTTGCAAGCTGAATGTCTGGGGTTCGAATCCCCATGCCTCCA

tRNA (yeast)
>gi|7276232:c443271-443198 Saccharomyces cerevisiae tRNA-Ile
GGTCTCTTGGCCCAGTTGGTTAAGGCACCGTGCTAATAACGCGGGGATCAGCGGTTCGATCCCGCTAGAGACCA

tRNA (archaeal)
>gi|68139851:c19184-19110 Ferroplasma acidarmanus tRNA-Ile
GGGGTTGTAGCTTAGCTTGGTTGGAGCACCCGGCTGATAACCGGGAGGTCACCGGTTCAAATCCGGTCAGCCCCA

Sno (yeast)
>Sc-snR52 gi|3135701|gb|AF064264.1|AF064264 Saccharomyces cerevisiae snR52
TACTATGATGAATGACATTAGCGTGAACAATCTCTGATACAAAATCGAAAGATTTTAGGATTAGAAAAACTTATGTTGCCTTCCTTCTGAAA

Sno (archaeal)
>gi|24414907:14827-14876 Pyrococcus abyssi complete genome; segment 5/6
TCAGGAAGCCGTCCACTCCTCACCGTTCAGGTGCGGAAGGCTTCATCATT

SnoGPS (human)
>Human H/ACA snoRNA sequence
CAGCCACCCGCCACTGCACCTGACCAGGTCTCTGTTGGCTGGTGCAATCCAGTGGTGAGCTGATAGTAAACCCCAGCTTAGGAAACAGGGTTGTTCTTCATGTGGATGACTCTGTGCCGAAAGCATGGGAACAGCT